Laboratory of Applied Microbiology and Biotechnology

Publications

Highlighted publications

Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies

Source
Nature - ISSN 1476-4687-613:7945 (2023) p. 639-649
Author(s)
    Katherine M. Kennedy, Marcus C. de Goffau, Maria Elisa Perez-Munoz, Marie-Claire Arrieta, Fredrik Backhed, Peer Bork, Thorsten Braun, Frederic D. Bushman, Joel Dore, Willem M. de Vos, Ashlee M. Earl, Jonathan A. Eisen, Michal A. Elovitz, Stephanie C. Ganal-Vonarburg, Michael G. Ganzle, Wendy S. Garrett, Lindsay J. Hall, Mathias W. Hornef, Curtis Huttenhower, Liza Konnikova, Sarah Lebeer, Andrew J. Macpherson, Ruth C. Massey, Alice Carolyn McHardy, Omry Koren, Trevor D. Lawley, Ruth E. Ley, Liam O'Mahony, Paul W. O'Toole, Eric G. Pamer, Julian Parkhill, Jeroen Raes, Thomas Rattei, Anne Salonen, Eran Segal, Nicola Segata, Fergus Shanahan, Deborah M. Sloboda, Gordon C.S. Smith, Harry Sokol, Tim D. Spector, Michael G. Surette, Gerald W. Tannock, Alan W. Walker, Moran Yassour, Jens Walter

A taxonomic note on the genus Lactobacillus : description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae

Source
International journal of systematic and evolutionary microbiology - ISSN 1466-5026-70:4 (2020) p. 2782-2858
Author(s)
    Jinshui Zheng, Stijn Wittouck, Elisa Salvetti, Charles M.A.P. Franz, Hugh M.B. Harris, Paola Mattarelli, Paul W. O’Toole, Bruno Pot, Peter Vandamme, Jens Walter, Koichi Watanabe, Sander Wuyts, Giovanna E. Felis, Michael G. Gänzle, Sarah Lebeer

Recent publications

Bacterial identification in SERS-integrated microfluidics using CNN-driven 2D classification of 1D spectra

Source
Talanta : the international journal of pure and applied analytical chemistry - ISSN 0039-9140-295 (2025) p. 1-11
Author(s)
    Mehdi Feizpour, Halewijn van den Bosche, Lilit Melikyan, Thomas Demuyser, Piet Cools, Hugo Thienpont, Tatevik Sarukhanyan, Heidi Ottevaere

Spray freeze drying as a novel drying process for the formulation of probiotic powders containing Lacticaseibacillus rhamnosus GG

Source
European journal of pharmaceutics and biopharmaceutics - ISSN 0939-6411-212 (2025) p. 1-11
Author(s)

Functional characterisation of rare variants in genes encoding the MAPK/ERK signalling pathway identified in long-lived Leiden Longevity Study participants

Source
GeroScience - ISSN 2509-2715- (2025) p.
Author(s)
    Maarouf Baghdadi, Helena Hinterding, Thies Gehrmann, Pasquale Putter, Mara Neuerburg, Nico Lakenberg, Erik B. van den Akker, P. Eline Slagboom, Joris Deelen, Linda Partridge

Standardizing a microbiome pipeline for body fluid identification from complex crime scene stains

Source
Applied and environmental microbiology - ISSN 0099-2240-91:5 (2025) p. 1-20
Author(s)
    Meghna Swayambhu, Mario Gysi, Cordula Haas, Larissa Schuh, Larissa Walser, Fardin Javanmard, Tamara Flury, Sarah Ahannach, Sarah Lebeer, Eirik Hanssen, Lars Snipen, Nicholas A. Bokulich, Rolf Kummerli, Natasha Arora