Research team
Expertise
Evaluation of (molecular) diagnostic assays for detection of respiratory viruses and bacteria Surveillance of vancomycin and linezolid resistance in Enterococci Detection of virulence and resistance genes in beta-hemolytic Streptococci Whole genome sequencing of Enterococci and beta-hemolytic Streptococci, including outbreak invastigation SARS-CoV-2 variant detection with SNP PCR and whole genome sequencing
Delving deeper into the resistance against linezolid and vancomycin in enterococci: mutual exclusiveness or a severe threat?
Abstract
Antimicrobial resistance is one of the biggest public health threats. Vancomycin resistant enterococci (VRE), causing e.g. urinary tract and bloodstream infections, are a prime example. Treatment options for VRE are limited, requiring the use of last-resort antibiotics such as linezolid. Hence, the emergence of linezolid resistant VRE (LVRE) poses a major health risk. Fortunately, the prevalence of linezolid resistant enterococci (LRE) is low and even lower among VRE. Worryingly, LRE are also found in animals, highlighting the need for a One Health approach. The extremely low prevalence of LVRE raises the question whether this is a mere coincidence, with the prevalence still able to rise in the future, or if it will always be limited. This project aims to elucidate the emergence and spread of LVRE by integrating state-of-the-art genomic analysis with wet-lab phenotypic assessments using a One Health approach. It seeks to characterize the population structure and relatedness between human and veterinary VRE, LRE and LVRE using whole genome sequencing, metadata and phylogenetic analysis. Furthermore, it will delve deeper into microbiological dynamics and study the risks of VRE evolving into LVRE through the acquisition of resistance conferring mutations or mobile resistance genes by using adaptive laboratory evolution, conjugation-assays and competition-assays to investigate whether excessive fitness costs may be a contributing factor hindering the emergence and spread of LVRE.Researcher(s)
- Promoter: Van Puyvelde Sandra
- Co-promoter: Matheeussen Veerle
- Co-promoter: Timbermont Leen
- Fellow: Braspenning Anouk
Research team(s)
Project type(s)
- Research Project
Dipeptidyl peptidase IV (CD26) in ischemia-reperfusion injury.
Abstract
Dipeptidyl peptidases are enzymes that cleave N-terminal dipeptides from peptides with proline at the penultimate position. Dipeptidyl peptidase IV is by far the most extensively studied member of this family of serine proteases. Recently, Zhai et al [1] described a decrease in ischemia/reperfusion injury after lung transplantation by flushing and storage of the graft in a solution with the irriversible DPPIV inhibitor, AB192. [2] The goal of this doctoral thesis is to investigate this positive effect on cellular level by measuring the expression of dipeptidyl peptidases (activity-, protein- and mRNA-level) in primarily islolated lung microvascular endothelial cells and the effect of reduced oxygen tension on the expression levels. Secondly, other possible targets of AB192 are investigated and the therapeutically available DPPIV inhibitors (vildagliptin and sitagliptin) are tested for the same positive effects during ischemia-reperfusion injury.Researcher(s)
- Promoter: De Meester Ingrid
- Fellow: Matheeussen Veerle
Research team(s)
Project type(s)
- Research Project
Dipeptidyl peptidase IV (CD26) in ischemia-reperfusion injury.
Abstract
Dipeptidyl peptidases are enzymes that cleave N-terminal dipeptides from peptides with proline at the penultimate position. Dipeptidyl peptidase IV is by far the most extensively studied member of this family of serine proteases. Recently, Zhai et al [1] described a decrease in ischemia/reperfusion injury after lung transplantation by flushing and storage of the graft in a solution with the irriversible DPPIV inhibitor, AB192. [2] The goal of this doctoral thesis is to investigate this positive effect on cellular level by measuring the expression of dipeptidyl peptidases (activity-, protein- and mRNA-level) in primarily islolated lung microvascular endothelial cells and the effect of reduced oxygen tension on the expression levels. Secondly, other possible targets of AB192 are investigated and the therapeutically available DPPIV inhibitors (vildagliptin and sitagliptin) are tested for the same positive effects during ischemia-reperfusion injury.Researcher(s)
- Promoter: De Meester Ingrid
- Fellow: Matheeussen Veerle
Research team(s)
Project type(s)
- Research Project